Protein ID

Protein ID:

Species:

Genus:

Order:


Node Degree:

Protein Length:

Sequence:

Help

This is a sequence similarty network. Each node represents a protein. An edge/line joining two nodes represents shared sequence similarity between the two proteins. Proteins are coloured according to their genus.

Click on a protein/node to view information about it.

The network can be filtered to hide/show particular proteins (e.g. by Genus or Order) using the buttons on the right.


Usage

  1. Left to right:
    • Zoom in
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    • Center view on network
  2. Toggle Edges: hides/shows all edges in the network. Hiding edges improves performance
  3. Toggle Labels: hides/shows labels for all nodes in the network. Hiding labels improves performance
  4. Filter box: type a query here to filter by Protein ID, Species, Genus or Order

Oomycete Effectors
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Oomycete Necrosis-inducing Proteins (NLPs)






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Genome Evolution Lab, Department of Biology, Maynooth University - 2017.